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Split Plot Analysis, Step by Step

A split-plot design has two factors at two scales. The main-plot factor is hard to randomise (irrigation, tillage, machinery) so it is applied to large plots. The sub-plot factor is easier to randomise (variety, fertiliser dose) and is applied within each main plot. The analysis has two error terms, one for each scale.

Open the Split-Plot calculator

Layout and randomization

Within each replicate (block), the levels of the main-plot factor A are assigned to large plots at random. Within each main plot, the levels of the sub-plot factor B are assigned to sub plots at random. The randomization is hierarchical: you do not randomise B across the whole replicate, only within each level of A. This is what makes the error structure two-tiered.

Two error term computations

Error a is computed from the main-plot residuals after fitting blocks and main-plot factor A. It is the error against which the main effect of A is tested. Error b is computed from the sub-plot residuals after fitting A, B and the A by B interaction. It is the error against which B and A by B are tested. Cochran and Cox (1957, Experimental Designs) and Gomez and Gomez (1984, Statistical Procedures for Agricultural Research) both give the explicit formulae for the SS partition.

Choosing post-hoc

Post-hoc comparisons depend on which factor you are comparing. Compare main-plot levels using error a's MS and df. Compare sub-plot levels (overall, or within a level of A) using error b's MS and df. The standard error of a difference between two main-plot means is the square root of 2 times MS_a divided by the number of sub plots per main-plot mean. The standard error for sub-plot comparisons uses MS_b. Mixing the two errors is the most common mistake in split-plot analysis.

Open the Split-Plot calculator

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